Abbie, A. A. (1940). Cortical lamination in the monotremata. Journal of Comparative Neurology, 72(3), 429–467.

Article  Google Scholar 

Alexander, L. M., Escalera, J., Ai, L., Andreotti, C., Febre, K., Mangone, A., Vega-Potler, N., Langer, N., Alexander, A., & Kovacs, M. (2017). An open resource for transdiagnostic research in pediatric mental health and learning disorders. Scientific data, 4(1), 1–26.

Article  CAS  Google Scholar 

Alkemade, A., Bazin, P. L., Balesar, R., Pine, K., Kirilina, E., Möller, H. E., Trampel, R., Kros, J. M., Keuken, M. C., & Bleys, R. L. (2022). A unified 3D map of microscopic architecture and MRI of the human brain. Science Advances, 8(17), eabj7892.

Article  CAS  PubMed  PubMed Central  Google Scholar 

Amunts, K., Lepage, C., Borgeat, L., Mohlberg, H., Dickscheid, T., Rousseau, M. É., Bludau, S., Bazin, P. L., Lewis, L. B., & Oros-Peusquens, A. M. (2013). BigBrain: An ultrahigh-resolution 3D human brain model. Science, 340(6139), 1472–1475.

Article  CAS  PubMed  Google Scholar 

Bailey, P., & von Bonin, G. (1951). The isocortex of Man. University of Illinois Press. https://books.google.ca/books?id=uvIcvQEACAAJ.

Bajada, C. J., Campos, C., Caspers, L. Q., Muscat, S., Parker, R., Ralph, G. J. M. L., Cloutman, M. A., L. L., & Trujillo-Barreto, N. J. (2020). A tutorial and tool for exploring feature similarity gradients with MRI data. Neuroimage, 221, 117140. https://doi.org/10.1016/j.neuroimage.2020.117140.

Article  PubMed  Google Scholar 

Ball, G., Seidlitz, J., Beare, R., & Seal, M. L. (2020). Cortical remodelling in childhood is associated with genes enriched for neurodevelopmental disorders. Neuroimage, 215, 116803.

Article  CAS  PubMed  Google Scholar 

Benkarim, O., Paquola, C., Park, B., Hong, S. J., Royer, J., Vos de Wael, R., Lariviere, S., Valk, S., Bzdok, D., Mottron, L., & Bernhardt, C., B (2021). Connectivity alterations in autism reflect functional idiosyncrasy. Communications Biology, 4(1), 1078. https://doi.org/10.1038/s42003-021-02572-6.

Article  PubMed  PubMed Central  Google Scholar 

Bernhardt, B. C., Smallwood, J., Keilholz, S., & Margulies, D. S. (2022). Gradients in brain organization. Neuroimage, 251, 118987. https://doi.org/10.1016/j.neuroimage.2022.118987.

Article  PubMed  Google Scholar 

Bethlehem, R., Falkiewicz, M., Freyberg, J., Parsons, O., Farahibozorg, S. R., Pretzsch, C., Soergel, B., & Margulies, D. (2017). Gradients of cortical hierarchy in Autism. Research Ideas and Outcomes, 3, e13391.

Article  Google Scholar 

Bethlehem, R. A., Paquola, C., Seidlitz, J., Ronan, L., Bernhardt, B., Tsvetanov, K. A.C.-C., & Consortium. (2020). Dispersion of functional gradients across the adult lifespan. Neuroimage, 222, 117299.

Article  PubMed  Google Scholar 

Blazquez Freches, G., Haak, K. V., Bryant, K. L., Schurz, M., Beckmann, C. F., & Mars, R. B. (2020). Principles of temporal association cortex organisation as revealed by connectivity gradients. Brain Structure and Function, 225(4), 1245–1260. https://doi.org/10.1007/s00429-020-02047-0.

Article  PubMed  Google Scholar 

Brodmann, K. (1909). Vergleichende Lokalisationslehre Der Grosshirnrinde in Ihren Prinzipien dargestellt auf Grund Des Zellenbaues. Barth.

Burt, J. B., Demirtaş, M., Eckner, W. J., Navejar, N. M., Ji, J. L., Martin, W. J., Bernacchia, A., Anticevic, A., & Murray, J. D. (2018). Hierarchy of transcriptomic specialization across human cortex captured by structural neuroimaging topography. Nature Neuroscience, 21(9), 1251–1259. https://doi.org/10.1038/s41593-018-0195-0.

Article  CAS  PubMed  PubMed Central  Google Scholar 

Burt, J. B., Helmer, M., Shinn, M., Anticevic, A., & Murray, J. D. (2020). Generative modeling of brain maps with spatial autocorrelation. NeuroImage, 220, 117038.

Cabalo, D. G., Dekraker, J., Royer, J., Xie, K., Tavakol, S., Rodriguez-Cruces, R., Bernasconi, A., Bernasconi, N., Weil, A., & Pana, R. (2023). Differential reorganization of episodic and semantic memory systems in epilepsy-related mesiotemporal pathology. bioRxiv, 2023 – 2009.

Casey, B. J., Cannonier, T., Conley, M. I., Cohen, A. O., Barch, D. M., Heitzeg, M. M., Soules, M. E., Teslovich, T., Dellarco, D. V., & Garavan, H. (2018). The adolescent brain cognitive development (ABCD) study: Imaging acquisition across 21 sites. Developmental Cognitive Neuroscience, 32, 43–54.

Article  CAS  PubMed  PubMed Central  Google Scholar 

Ciantar, K. G., Farrugia, C., Galdi, P., Scerri, K., Xu, T., & Bajada, C. J. (2022). Geometric effects of volume-to-surface mapping of fMRI data. Brain Structure and Function, 227(7), 2457–2464.

Article  PubMed  Google Scholar 

Coletta, L., Pagani, M., Whitesell, J. D., Harris, J. A., Bernhardt, B., & Gozzi, A. (2020). Network structure of the mouse brain connectome with voxel resolution. Science Advances, 6(51), eabb7187.

Article  CAS  PubMed  PubMed Central  Google Scholar 

Cona, G., Wiener, M., & Scarpazza, C. (2021). From ATOM to GradiATOM: Cortical gradients support time and space processing as revealed by a meta-analysis of neuroimaging studies. Neuroimage, 224, 117407.

Article  PubMed  Google Scholar 

Cross, N., Paquola, C., Pomares, F. B., Perrault, A. A., Jegou, A., Nguyen, A., Aydin, U., Bernhardt, B. C., Grova, C., & Dang-Vu, T. T. (2021). Cortical gradients of functional connectivity are robust to state-dependent changes following sleep deprivation. NeuroImage, 226, 117547.

Dadi, K., Varoquaux, G., Machlouzarides-Shalit, A., Gorgolewski, K. J., Wassermann, D., Thirion, B., & Mensch, A. (2020). Fine-grain atlases of functional modes for fMRI analysis. Neuroimage, 221, 117126.

Article  PubMed  Google Scholar 

Dart, R. A. (1934). The dual structure of the neopallium: Its history and significance. Journal of Anatomy, 69(Pt 1), 3.

CAS  PubMed  PubMed Central  Google Scholar 

de Vos, R., Larivière, S., Caldairou, B., Hong, S. J., Margulies, D. S., Jefferies, E., Bernasconi, A., Smallwood, J., Bernasconi, N., & Bernhardt, B. C. (2018). Anatomical and microstructural determinants of hippocampal subfield functional connectome embedding. Proceedings of the National Academy of Sciences, 115(40), 10154–10159.

de Vos, R., Benkarim, O., Paquola, C., Lariviere, S., Royer, J., Tavakol, S., Xu, T., Hong, S. J., Langs, G., Valk, S., Misic, B., Milham, M., Margulies, D., Smallwood, J., & Bernhardt, B. C. (2020). BrainSpace: A toolbox for the analysis of macroscale gradients in neuroimaging and connectomics datasets. Communications Biology, 3(1), 103. https://doi.org/10.1038/s42003-020-0794-7.

Article  Google Scholar 

de Vos, R., Royer, J., Tavakol, S., Wang, Y., Paquola, C., Benkarim, O., Eichert, N., Larivière, S., Xu, T., & Misic, B. (2021). Structural connectivity gradients of the temporal lobe serve as multiscale axes of brain organization and cortical evolution. Cerebral Cortex, 31(11), 5151–5164.

Article  Google Scholar 

DeKraker, J., Cabalo, D. G., Royer, J., Khan, A. R., Karat, B., Benkarim, O., ... & Bernhardt, B. C. (2024). HippoMaps: Multiscale cartography of human hippocampal organization. bioRxiv, 2024–02.

Dear, R., Seidlitz, J., Markello, R. D., Arnatkevičiūtė, A., Anderson, K. M., Bethlehem, R. A. I., Brain Chart, L., Wagstyl, C., Bullmore, K., E. T., & Raznahan, A. (2022). Three transcriptional axes underpin anatomy, development, and disorders of the human cortex. bioRxiv, 2022 – 2010.

Di Martino, A., Yan, C. G., Li, Q., Denio, E., Castellanos, F. X., Alaerts, K., Anderson, J. S., Assaf, M., Bookheimer, S. Y., & Dapretto, M. (2014). The autism brain imaging data exchange: Towards a large-scale evaluation of the intrinsic brain architecture in autism. Molecular Psychiatry, 19(6), 659–667.

Article  PubMed  Google Scholar 

Di Martino, A., O’connor, D., Chen, B., Alaerts, K., Anderson, J. S., Assaf, M., Balsters, J. H., Baxter, L., Beggiato, A., & Bernaerts, S. (2017). Enhancing studies of the connectome in autism using the autism brain imaging data exchange II. Scientific data, 4(1), 1–15.

Article  Google Scholar 

Dohmatob, E., Richard, H., Pinho, A. L., & Thirion, B. (2021). Brain topography beyond parcellations: local gradients of functional maps. NeuroImage, 229, 117706.

Freeman, J. (2015). Open source tools for large-scale neuroscience. Current Opinion in Neurobiology, 32, 156–163. https://doi.org/10.1016/j.conb.2015.04.002.

Article  CAS  PubMed  Google Scholar 

Friedrich, P., Forkel, S. J., & de Schotten, M. T. (2020). Mapping the principal gradient onto the corpus callosum. Neuroimage, 223, 117317.

Article  PubMed  Google Scholar 

Froudist-Walsh, S., Xu, T., Niu, M., Rapan, L., Zhao, L., Margulies, D. S., Zilles, K., Wang, X. J., & Palomero-Gallagher, N. (2023). Gradients of neurotransmitter receptor expression in the macaque cortex. Nature Neuroscience, 1–14.

Fulcher, B. D., Murray, J. D., Zerbi, V., & Wang, X. J. (2019). Multimodal gradients across mouse cortex. Proceedings of the National Academy of Sciences, 116(10), 4689–4695.

Article  Google Scholar 

Gao, Z., Zheng, L., Krieger-Redwood, K., Halai, A., Margulies, D. S., Smallwood, J., & Jefferies, E. (2022). Flexing the principal gradient of the cerebral cortex to suit changing semantic task demands. Elife, 11, e80368. https://doi.org/10.7554/eLife.80368.

Article  CAS  PubMed  PubMed Central  Google Scholar 

García-Cabezas, M. Á., Zikopoulos, B., & Barbas, H. (2019). The Structural Model: A theory linking connections, plasticity, pathology, development and evolution of the cerebral cortex. Brain Structure and Function, 224(3), 985–1008.

Article  PubMed  Google Scholar 

Gau, R., Noble, S., Heuer, K., Bottenhorn, K. L., Bilgin, I. P., Yang, Y. F., Huntenburg, J. M., Bayer, J. M., Bethlehem, R. A., & Rhoads, S. A. (2021). Brainhack: Developing a culture of open, inclusive, community-driven neuroscience. Neuron, 109(11), 1769–1775.

Article  CAS  PubMed  PubMed Central  Google Scholar 

Genon, S., Bernhardt, B. C., La Joie, R., Amunts, K., & Eickhoff, S. B. (2021). The many dimensions of human hippocampal organization and (dys) function. Trends in Neurosciences, 44(12), 977–989.

Article  CAS  PubMed  PubMed Central